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Commit 4b1b2d8b authored by Marius Hintsche's avatar Marius Hintsche
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fix input file parsing

parent 13f52725
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GroupedProjectionsBatch.ijm
+ 3
− 2
View file @ 4b1b2d8b
...@@ -36,7 +36,7 @@ function processFolder(input) { ...@@ -36,7 +36,7 @@ function processFolder(input) {
// Single file projections // Single file projections
function processFile(inputFile,basePath) { function processFile(inputFile,basePath) {
// open input input file // open input input file
run("Bio-Formats Importer", "open="+inputFile+" color_mode=Default rois_import=[ROI manager] view=Hyperstack stack_order=XYCZT use_virtual_stack"); run("Bio-Formats Importer", "open=["+inputFile+"] color_mode=Default rois_import=[ROI manager] view=Hyperstack stack_order=XYCZT use_virtual_stack");
inputID = getImageID(); inputID = getImageID();
// Input checking // Input checking
...@@ -140,4 +140,5 @@ function getBar(p1, p2) { ...@@ -140,4 +140,5 @@ function getBar(p1, p2) {
return substring(bar2, 0, index) + substring(bar1, index+1, n); return substring(bar2, 0, index) + substring(bar1, index+1, n);
} }
} }
} }
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